CRISPRone

CRISPRone report for GCA_003186435.1_ASM318643v1

♦ Seq 1: QHLS01003415.1 Pseudomonas aeruginosa strain LIM4285 NODE_3463_length_17731_cov_12.635272, whole genome shotgun sequence

⇒Summary: seq-len = 17821 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-10528 bp Zoom in on locus 1 x40 Gene: cd09641:cas3HD Type: Type-I Location: 2-2149 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 2200-2874 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 2871-4664 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 4661-5530 bp Gene: pfam01930:cas4 Type: Type-I Location: 5549-6181 bp Gene: cd09721:cas1 Type: universal Location: 6185-7225 bp Gene: cd09725:cas2 Type: universal Location: 7235-7525 bp CRISPR array Location: 7707-10327 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 7707-10327 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 7742-8254 bp Gene: unk Type: unknown Location: 9074-10111 bp Gene: cd09735:cas8f Type: Subtype-I-F Location: 10154-10528 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 7707-10327 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)