CRISPRone

CRISPRone report for GCA_003194245.1_ASM319424v1

♦ Seq 1: CP023255.1 Pseudomonas aeruginosa strain CCUG 70744 chromosome, complete genome

⇒Summary: seq-len = 6859232 bp; # of CRISPR array = 2; # of cas gene = 11  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2462384-2472833 bp 2 Locus 2: 5909380-5919965 bp Zoom in on locus 1 x12 x9 Zoom in on locus 2 CRISPR array Location: 2462384-2463083 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 2462384-2463083 bp Num of repeats: 12 Spacers: s1-s11 Gene: pfam09707:cas2 Type: universal Location: 2463148-2463447 bp Gene: cd09719:cas1 Type: universal Location: 2463444-2464334 bp Gene: pfam08798:cas6e Type: other Location: 2464361-2464900 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 2464947-2465609 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 2465611-2466753 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 2466763-2467293 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 2467290-2468858 bp Gene: cd09641:cas3HD Type: Type-I Location: 2468861-2471542 bp CRISPR array Location: 2472316-2472833 bp Num of repeats: 9 Spacers: s12-s19 CRISPR array Location: 2472316-2472833 bp Num of repeats: 9 Spacers: s12-s19 Gene: COG0640:csa3 Type: Subtype-I-A Location: 5909380-5910249 bp Gene: pfam00078:RT Type: other Location: 5915158-5916426 bp Gene: unk Type: unknown Location: 5916576-5916974 bp Gene: unk Type: unknown Location: 5917158-5917337 bp Gene: cls000170:cas4 Type: Type-I Location: 5918421-5919965 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2462384-2463083 bp]: array | spacers
           [Locus range 2472316-2472833 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)