CRISPRone

CRISPRone report for GCA_003204235.1_ASM320423v1

♦ Seq 1: QJOX01000062.1 Pseudomonas aeruginosa strain LIM4308 NODE_70_length_36891_cov_14.460682, whole genome shotgun sequence

⇒Summary: seq-len = 36981 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18100-28713 bp Zoom in on locus 1 x40 Gene: cd09735:cas8f Type: Subtype-I-F Location: 18100-18474 bp CRISPR array Location: 18302-20921 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 18302-20921 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 18517-19554 bp Gene: unk Type: unknown Location: 20374-20886 bp Gene: cd09725:cas2 Type: universal Location: 21103-21393 bp Gene: cd09721:cas1 Type: universal Location: 21403-22443 bp Gene: pfam01930:cas4 Type: Type-I Location: 22447-23079 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 23098-23967 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 23964-25757 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 25754-26428 bp Gene: cd09641:cas3HD Type: Type-I Location: 26479-28713 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 18302-20921 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)