CRISPRone

CRISPRone report for GCA_003204335.1_ASM320433v1

♦ Seq 1: CP029745.1 Pseudomonas aeruginosa strain AR_0110 chromosome, complete genome

⇒Summary: seq-len = 6799785 bp; # of CRISPR array = 3; # of cas gene = 10  (type I, IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1071786-1080047 bp 2 Locus 2: 3111304-3122882 bp 3 Locus 3: 5946462-5947389 bp Zoom in on locus 1 Zoom in on locus 2 x23 x28 Zoom in on locus 3 x16 Gene: mkCas0115:csx3 Type: other Location: 1071786-1073396 bp Gene: pfam13280:WYL Type: other Location: 1073557-1074573 bp Gene: COG2378:WYL Type: other Location: 1075315-1076157 bp Gene: unk Type: unknown Location: 1076411-1076566 bp Gene: unk Type: unknown Location: 1076710-1077288 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 1077681-1080047 bp CRISPR array Location: 3111304-3112649 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 3111304-3112649 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09739:cas6f Type: other Location: 3112833-3113396 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3113400-3114428 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3114439-3115422 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3115409-3116713 bp Gene: COG1203:cas3 Type: Type-I Location: 3116771-3120001 bp Gene: cd09718:cas1 Type: universal Location: 3119998-3120972 bp CRISPR array Location: 3121234-3122882 bp Num of repeats: 28 Spacers: s23-s49 CRISPR array Location: 3121234-3122882 bp Num of repeats: 28 Spacers: s23-s49 CRISPR array Location: 5946462-5947389 bp Num of repeats: 16 Spacers: s50-s64 CRISPR array Location: 5946462-5947389 bp Num of repeats: 16 Spacers: s50-s64 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3111304-3112649 bp]: array | spacers
           [Locus range 3121234-3122882 bp]: array | spacers
           [Locus range 5946462-5947389 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)