CRISPRone

CRISPRone report for GCA_003204435.1_ASM320443v1

♦ Seq 1: QJPD01000084.1 Pseudomonas aeruginosa strain LIM1256 NODE_93_length_20959_cov_24.798941, whole genome shotgun sequence

⇒Summary: seq-len = 21049 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2354-12967 bp Zoom in on locus 1 x40 Gene: cd09735:cas8f Type: Subtype-I-F Location: 2354-2728 bp CRISPR array Location: 2556-5175 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 2556-5175 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 2936-3808 bp Gene: unk Type: unknown Location: 4628-5140 bp Gene: cd09725:cas2 Type: universal Location: 5357-5647 bp Gene: cd09721:cas1 Type: universal Location: 5657-6697 bp Gene: pfam01930:cas4 Type: Type-I Location: 6701-7333 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 7352-8221 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 8218-10011 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 10008-10682 bp Gene: cd09641:cas3HD Type: Type-I Location: 10733-12967 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2556-5175 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)