CRISPRone

CRISPRone report for GCA_003204515.1_ASM320451v1

♦ Seq 1: QJPG01000063.1 Pseudomonas aeruginosa strain LIM1209 NODE_85_length_37542_cov_85.065475, whole genome shotgun sequence

⇒Summary: seq-len = 37692 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8329-18942 bp Zoom in on locus 1 x40 Gene: cd09641:cas3HD Type: Type-I Location: 8329-10563 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 10614-11288 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 11285-13078 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 13075-13944 bp Gene: pfam01930:cas4 Type: Type-I Location: 13963-14595 bp Gene: cd09721:cas1 Type: universal Location: 14599-15639 bp Gene: cd09725:cas2 Type: universal Location: 15649-15939 bp CRISPR array Location: 16121-18741 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 16121-18741 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 16156-16668 bp Gene: unk Type: unknown Location: 17488-18525 bp Gene: cd09735:cas8f Type: Subtype-I-F Location: 18568-18942 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 16121-18741 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)