CRISPRone

CRISPRone report for GCA_003204975.1_ASM320497v1

♦ Seq 1: QJPE01000147.1 Pseudomonas aeruginosa strain LIM1547 NODE_167_length_20893_cov_16.784185, whole genome shotgun sequence

⇒Summary: seq-len = 20983 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8083-18696 bp Zoom in on locus 1 x40 Gene: cd09641:cas3HD Type: Type-I Location: 8083-10317 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 10368-11042 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 11039-12832 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 12829-13698 bp Gene: pfam01930:cas4 Type: Type-I Location: 13717-14349 bp Gene: cd09721:cas1 Type: universal Location: 14353-15393 bp Gene: cd09725:cas2 Type: universal Location: 15403-15693 bp CRISPR array Location: 15875-18495 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 15875-18495 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 15910-16422 bp Gene: unk Type: unknown Location: 17242-18279 bp Gene: cd09735:cas8f Type: Subtype-I-F Location: 18322-18696 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 15875-18495 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)