CRISPRone

CRISPRone report for GCA_003288335.1_ASM328833v1

♦ Seq 1: CP030351.1 Pseudomonas aeruginosa strain AR_460 chromosome, complete genome

⇒Summary: seq-len = 6303875 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1168430-1177663 bp 2 Locus 2: 6161699-6162507 bp Zoom in on locus 1 x7 x5 Zoom in on locus 2 x14 CRISPR array Location: 1168430-1168818 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 1168430-1168818 bp Num of repeats: 7 Spacers: s1-s6 Gene: cd09739:cas6f Type: other Location: 1169002-1169565 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1169569-1170597 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1170608-1171591 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1171578-1172882 bp Gene: COG1203:cas3 Type: Type-I Location: 1172940-1176170 bp Gene: cd09718:cas1 Type: universal Location: 1176167-1177138 bp CRISPR array Location: 1177396-1177663 bp Num of repeats: 5 Spacers: s7-s10 CRISPR array Location: 1177396-1177663 bp Num of repeats: 5 Spacers: s7-s10 CRISPR array Location: 6161699-6162507 bp Num of repeats: 14 Spacers: s11-s23 CRISPR array Location: 6161699-6162507 bp Num of repeats: 14 Spacers: s11-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1168430-1168818 bp]: array | spacers
           [Locus range 1177396-1177663 bp]: array | spacers
           [Locus range 6161699-6162507 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)