CRISPRone

CRISPRone report for GCA_003324385.1_ASM332438v1

♦ Seq 1: QMGL01000001.1 Pseudomonas aeruginosa strain AR_0449 AR_449.contig.0_1, whole genome shotgun sequence

⇒Summary: seq-len = 6223626 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 373430-374058 bp Zoom in on locus 1 x11 CRISPR array Location: 373430-374058 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 373430-374058 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 373430-374058 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QMGL01000004.1 Pseudomonas aeruginosa strain AR_0449 AR_449.contig.3_1, whole genome shotgun sequence

⇒Summary: seq-len = 499981 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 195919-206504 bp Zoom in on locus 1 Gene: cls000170:cas4 Type: Type-I Location: 195919-197463 bp Gene: unk Type: unknown Location: 198547-198726 bp Gene: pfam00078:RT Type: other Location: 199458-200726 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 205635-206504 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)