CRISPRone

CRISPRone report for GCA_003324555.1_ASM332455v1

♦ Seq 1: QOLE01000001.1 Pseudomonas aeruginosa strain TUEPA7472 scaffold1_size2116198, whole genome shotgun sequence

⇒Summary: seq-len = 2116198 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1715993-1716560 bp Zoom in on locus 1 x10 CRISPR array Location: 1715993-1716560 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 1715993-1716560 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1715993-1716560 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QOLE01000002.1 Pseudomonas aeruginosa strain TUEPA7472 scaffold2_size1895380, whole genome shotgun sequence

⇒Summary: seq-len = 1895380 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 75450-86035 bp Zoom in on locus 1 Gene: cls000170:cas4 Type: Type-I Location: 75450-76994 bp Gene: unk Type: unknown Location: 78078-78257 bp Gene: pfam00078:RT Type: other Location: 78989-80257 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 85166-86035 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)