CRISPRone

CRISPRone report for GCA_003325605.1_ASM332560v1

♦ Seq 1: QORE01001028.1 Pseudomonas aeruginosa strain B2-305 HC305_contig01028, whole genome shotgun sequence

⇒Summary: seq-len = 1912 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18-1910 bp Zoom in on locus 1 x9 CRISPR array Location: 18-526 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 18-526 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09718:cas1 Type: universal Location: 787-1761 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 1758-1910 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 18-526 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QORE01001929.1 Pseudomonas aeruginosa strain B2-305 HC305_contig01929, whole genome shotgun sequence

⇒Summary: seq-len = 684 bp; # of CRISPR array = 0; # of cas gene = 1  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-616 bp Zoom in on locus 1 Gene: cd09736:cas5f Type: Subtype-I-F Location: 2-616 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QORE01001524.1 Pseudomonas aeruginosa strain B2-305 HC305_contig01524, whole genome shotgun sequence

⇒Summary: seq-len = 1108 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-1108 bp Zoom in on locus 1 x19 CRISPR array Location: 1-1108 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1-1108 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-1108 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QORE01000061.1 Pseudomonas aeruginosa strain B2-305 HC305_contig00061, whole genome shotgun sequence

⇒Summary: seq-len = 7995 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-4085 bp Zoom in on locus 1 Gene: COG1203:cas3 Type: Type-I Location: 3-2738 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2796-4085 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QORE01000523.1 Pseudomonas aeruginosa strain B2-305 HC305_contig00523, whole genome shotgun sequence

⇒Summary: seq-len = 3436 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-2029 bp Zoom in on locus 1 x14 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1-471 bp Gene: cd09739:cas6f Type: other Location: 475-1038 bp CRISPR array Location: 1222-2029 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 1222-2029 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1222-2029 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)