CRISPRone

CRISPRone report for GCA_003325625.1_ASM332562v1

♦ Seq 1: QORA01000116.1 Pseudomonas aeruginosa strain F2-1206 1206115_S36_R2_001_contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 120017 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13580-21841 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 13580-15946 bp Gene: unk Type: unknown Location: 16339-16986 bp Gene: unk Type: unknown Location: 17052-17339 bp Gene: COG2378:WYL Type: other Location: 17470-18312 bp Gene: pfam13280:WYL Type: other Location: 19054-20070 bp Gene: mkCas0115:csx3 Type: other Location: 20216-21841 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QORA01000278.1 Pseudomonas aeruginosa strain F2-1206 1206115_S36_R2_001_contig_42, whole genome shotgun sequence

⇒Summary: seq-len = 91593 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71-279 bp Zoom in on locus 1 x4 CRISPR array Location: 71-279 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 71-279 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 71-279 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)