CRISPRone

CRISPRone report for GCA_003332585.1_ASM333258v1

♦ Seq 1: QDGU01000012.1 Pseudomonas aeruginosa strain PA102 contig000012, whole genome shotgun sequence

⇒Summary: seq-len = 202025 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182144-193572 bp Zoom in on locus 1 x26 x9 CRISPR array Location: 182144-183700 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 182144-183700 bp Num of repeats: 26 Spacers: s1-s25 Gene: pfam09707:cas2 Type: universal Location: 183765-184064 bp Gene: cd09719:cas1 Type: universal Location: 184061-184951 bp Gene: pfam08798:cas6e Type: other Location: 184978-185517 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 185564-186226 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 186228-187370 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 187380-187910 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 187907-189475 bp Gene: cd09641:cas3HD Type: Type-I Location: 189478-192159 bp CRISPR array Location: 193056-193572 bp Num of repeats: 9 Spacers: s26-s33 CRISPR array Location: 193056-193572 bp Num of repeats: 9 Spacers: s26-s33 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182144-183700 bp]: array | spacers
           [Locus range 193056-193572 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QDGU01000001.1 Pseudomonas aeruginosa strain PA102 contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 685839 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 496185-497114 bp Zoom in on locus 1 x16 CRISPR array Location: 496185-497114 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 496185-497114 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 496185-497114 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)