CRISPRone

CRISPRone report for GCA_003332735.1_ASM333273v1

♦ Seq 1: QDGX01000018.1 Pseudomonas aeruginosa strain PA32 contig000018, whole genome shotgun sequence

⇒Summary: seq-len = 137879 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 69346-79931 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 69346-70215 bp Gene: pfam00078:RT Type: other Location: 75124-76392 bp Gene: unk Type: unknown Location: 76542-76940 bp Gene: unk Type: unknown Location: 77124-77303 bp Gene: cls000170:cas4 Type: Type-I Location: 78387-79931 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QDGX01000072.1 Pseudomonas aeruginosa strain PA32 contig000072, whole genome shotgun sequence

⇒Summary: seq-len = 3996 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 345-913 bp Zoom in on locus 1 x10 CRISPR array Location: 345-913 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 345-913 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 345-913 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)