CRISPRone

CRISPRone report for GCA_003332755.1_ASM333275v1

♦ Seq 1: QDGO01000018.1 Pseudomonas aeruginosa strain PA35 contig000018, whole genome shotgun sequence

⇒Summary: seq-len = 145616 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 65719-76304 bp Zoom in on locus 1 Gene: cls000170:cas4 Type: Type-I Location: 65719-67263 bp Gene: unk Type: unknown Location: 68347-68526 bp Gene: pfam00078:RT Type: other Location: 69258-70526 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 75435-76304 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QDGO01000016.1 Pseudomonas aeruginosa strain PA35 contig000016, whole genome shotgun sequence

⇒Summary: seq-len = 154349 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3718-4285 bp Zoom in on locus 1 x10 CRISPR array Location: 3718-4285 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 3718-4285 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3718-4285 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)