CRISPRone

CRISPRone report for GCA_003363115.1_ASM336311v1

♦ Seq 1: QRBX01000008.1 Bacteroides fragilis strain HCK-B3 scaffold8, whole genome shotgun sequence

⇒Summary: seq-len = 239494 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 84169-99435 bp Zoom in on locus 1 x23 Gene: cls000004:cas6 Type: other Location: 84169-84900 bp Gene: unk Type: unknown Location: 84918-85544 bp Gene: unk Type: unknown Location: 85520-86299 bp Gene: cash17:cash17 Type: Type- Location: 86344-87771 bp Gene: unk Type: unknown Location: 87768-88247 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 88261-89670 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 89675-91477 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 91470-92609 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 92629-93468 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 93481-93891 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 93894-94838 bp Gene: cd09634:cas1 Type: universal Location: 94858-97128 bp Gene: cd09725:cas2 Type: universal Location: 97122-97412 bp CRISPR array Location: 97860-99435 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 97860-99435 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 97860-99435 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QRBX01000009.1 Bacteroides fragilis strain HCK-B3 scaffold9, whole genome shotgun sequence

⇒Summary: seq-len = 213904 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 94320-97933 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 94320-95219 bp Gene: unk Type: unknown Location: 95216-96481 bp Gene: unk Type: unknown Location: 96489-97262 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 97265-97933 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QRBX01000013.1 Bacteroides fragilis strain HCK-B3 scaffold13, whole genome shotgun sequence

⇒Summary: seq-len = 163628 bp; # of CRISPR array = 0; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 136-6749 bp Zoom in on locus 1 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 136-468 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 472-1404 bp Gene: unk Type: unknown Location: 1524-1781 bp Gene: unk Type: unknown Location: 1899-2423 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 2439-6749 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)