CRISPRone

CRISPRone report for GCA_003410435.2_ASM341043v2

♦ Seq 1: QVBE02000024.1 Pseudomonas aeruginosa strain PABL092 NODE_24_length_94557_cov_90.3537, whole genome shotgun sequence

⇒Summary: seq-len = 94557 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 93871-94439 bp Zoom in on locus 1 x10 CRISPR array Location: 93871-94439 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 93871-94439 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 93871-94439 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QVBE02000066.1 Pseudomonas aeruginosa strain PABL092 NODE_66_length_24845_cov_102.231, whole genome shotgun sequence

⇒Summary: seq-len = 24845 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4297-8090 bp Zoom in on locus 1 Gene: pfam09002:csx1 Type: Type-III Location: 4297-4773 bp Gene: unk Type: unknown Location: 4856-4999 bp Gene: pfam13280:WYL Type: other Location: 5105-6010 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 6012-8090 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)