CRISPRone

CRISPRone report for GCA_003410565.2_ASM341056v2

♦ Seq 1: QVAT02000059.1 Pseudomonas aeruginosa strain PABL104 NODE_59_length_20650_cov_35.3081, whole genome shotgun sequence

⇒Summary: seq-len = 20650 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 119-688 bp Zoom in on locus 1 x10 CRISPR array Location: 119-688 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 119-688 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 119-688 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QVAT02000025.1 Pseudomonas aeruginosa strain PABL104 NODE_25_length_100392_cov_35.7745, whole genome shotgun sequence

⇒Summary: seq-len = 100392 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16725-20518 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 16725-18803 bp Gene: pfam13280:WYL Type: other Location: 18805-19710 bp Gene: pfam09002:csx1 Type: Type-III Location: 20042-20518 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)