CRISPRone

CRISPRone report for GCA_003410745.2_ASM341074v2

♦ Seq 1: QVCJ02000036.1 Pseudomonas aeruginosa strain PABL060 NODE_36_length_62897_cov_57.5474, whole genome shotgun sequence

⇒Summary: seq-len = 62897 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33058-43557 bp Zoom in on locus 1 x19 x14 CRISPR array Location: 33058-34166 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 33058-34166 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 34349-34912 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 34916-35944 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 35955-36938 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 36925-38229 bp Gene: COG1203:cas3 Type: Type-I Location: 38287-41517 bp Gene: cd09718:cas1 Type: universal Location: 41514-42488 bp CRISPR array Location: 42750-43557 bp Num of repeats: 14 Spacers: s19-s31 CRISPR array Location: 42750-43557 bp Num of repeats: 14 Spacers: s19-s31 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33058-34166 bp]: array | spacers
           [Locus range 42750-43557 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)