CRISPRone

CRISPRone report for GCA_003411145.2_ASM341114v2

♦ Seq 1: QVBQ02000058.1 Pseudomonas aeruginosa strain PABL079 NODE_58_length_26239_cov_73.3741, whole genome shotgun sequence

⇒Summary: seq-len = 26239 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13577-24021 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 13577-14685 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 13577-14685 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 14945-15919 bp Gene: COG1203:cas3 Type: Type-I Location: 15916-19146 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 19204-20508 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 20495-21478 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 21489-22517 bp Gene: cd09739:cas6f Type: other Location: 22521-23084 bp CRISPR array Location: 23334-24021 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 23334-24021 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 13577-14685 bp]: array | spacers
           [Locus range 23334-24021 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)