CRISPRone

CRISPRone report for GCA_003411185.2_ASM341118v2

♦ Seq 1: QVBR02000025.1 Pseudomonas aeruginosa strain PABL078 NODE_25_length_71487_cov_63.7576, whole genome shotgun sequence

⇒Summary: seq-len = 71487 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21881-33452 bp Zoom in on locus 1 x22 x23 CRISPR array Location: 21881-23170 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 21881-23170 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 23430-24404 bp Gene: COG1203:cas3 Type: Type-I Location: 24401-27631 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28042-29343 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29330-30313 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30324-31352 bp Gene: cd09739:cas6f Type: other Location: 31356-31919 bp CRISPR array Location: 32104-33452 bp Num of repeats: 23 Spacers: s22-s43 CRISPR array Location: 32104-33452 bp Num of repeats: 23 Spacers: s22-s43 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21881-23170 bp]: array | spacers
           [Locus range 32104-33452 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)