CRISPRone

CRISPRone report for GCA_003411285.2_ASM341128v2

♦ Seq 1: QVCA02000037.1 Pseudomonas aeruginosa strain PABL069 NODE_37_length_60417_cov_101.844, whole genome shotgun sequence

⇒Summary: seq-len = 60417 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26489-42247 bp Zoom in on locus 1 Gene: pfam00078:RT Type: other Location: 26489-28207 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 32331-32651 bp Gene: mkCas0090:PD-DExK Type: other Location: 41522-42247 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QVCA02000015.1 Pseudomonas aeruginosa strain PABL069 NODE_15_length_120909_cov_90.0617, whole genome shotgun sequence

⇒Summary: seq-len = 120909 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 107-856 bp Zoom in on locus 1 x13 CRISPR array Location: 107-856 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 107-856 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 107-856 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)