CRISPRone

CRISPRone report for GCA_003411365.2_ASM341136v2

♦ Seq 1: QVDN02000014.1 Pseudomonas aeruginosa strain PABL027 NODE_14_length_85491_cov_69.5167, whole genome shotgun sequence

⇒Summary: seq-len = 85491 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 7554-23312 bp Zoom in on locus 1 Gene: mkCas0090:PD-DExK Type: other Location: 7554-8279 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 17150-17470 bp Gene: pfam00078:RT Type: other Location: 21594-23312 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QVDN02000110.1 Pseudomonas aeruginosa strain PABL027 NODE_110_length_16974_cov_57.2324, whole genome shotgun sequence

⇒Summary: seq-len = 16974 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16120-16868 bp Zoom in on locus 1 x13 CRISPR array Location: 16120-16868 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 16120-16868 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 16120-16868 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)