CRISPRone

CRISPRone report for GCA_003411425.2_ASM341142v2

♦ Seq 1: QVCE02000084.1 Pseudomonas aeruginosa strain PABL065 NODE_84_length_24592_cov_65.6976, whole genome shotgun sequence

⇒Summary: seq-len = 24592 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8263-20301 bp Zoom in on locus 1 x18 x29 CRISPR array Location: 8263-9329 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 8263-9329 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09641:cas3HD Type: Type-I Location: 10103-12784 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12787-14355 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 14352-14882 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14892-16034 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 16036-16698 bp Gene: pfam08798:cas6e Type: other Location: 16673-17284 bp Gene: cd09719:cas1 Type: universal Location: 17311-18201 bp Gene: pfam09707:cas2 Type: universal Location: 18198-18497 bp CRISPR array Location: 18562-20301 bp Num of repeats: 29 Spacers: s18-s45 CRISPR array Location: 18562-20301 bp Num of repeats: 29 Spacers: s18-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8263-9329 bp]: array | spacers
           [Locus range 18562-20301 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)