CRISPRone

CRISPRone report for GCA_003411505.2_ASM341150v2

♦ Seq 1: QVCZ02000072.1 Pseudomonas aeruginosa strain PABL043 NODE_72_length_29589_cov_64.7766, whole genome shotgun sequence

⇒Summary: seq-len = 29589 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 83-350 bp Zoom in on locus 1 x5 CRISPR array Location: 83-350 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 83-350 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 83-350 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QVCZ02000007.1 Pseudomonas aeruginosa strain PABL043 NODE_7_length_122995_cov_78.0998, whole genome shotgun sequence

⇒Summary: seq-len = 122995 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4634-4962 bp Zoom in on locus 1 x6 CRISPR array Location: 4634-4962 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 4634-4962 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 4634-4962 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QVCZ02000012.1 Pseudomonas aeruginosa strain PABL043 NODE_12_length_102199_cov_88.6932, whole genome shotgun sequence

⇒Summary: seq-len = 102199 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13615-21876 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 13615-15981 bp Gene: unk Type: unknown Location: 16374-17021 bp Gene: unk Type: unknown Location: 17087-17455 bp Gene: COG2378:WYL Type: other Location: 17505-18347 bp Gene: pfam13280:WYL Type: other Location: 19089-20105 bp Gene: mkCas0115:csx3 Type: other Location: 20266-21876 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)