CRISPRone

CRISPRone report for GCA_003411555.2_ASM341155v2

♦ Seq 1: QVCO02000048.1 Pseudomonas aeruginosa strain PABL055 NODE_48_length_45627_cov_37.7093, whole genome shotgun sequence

⇒Summary: seq-len = 45627 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8322-19140 bp Zoom in on locus 1 x11 x16 CRISPR array Location: 8322-8962 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 8322-8962 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09641:cas3HD Type: Type-I Location: 9737-12418 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12421-13989 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 13986-14516 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14526-15668 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15670-16332 bp Gene: pfam08798:cas6e Type: other Location: 16307-16918 bp Gene: cd09719:cas1 Type: universal Location: 16945-17835 bp Gene: pfam09707:cas2 Type: universal Location: 17832-18131 bp CRISPR array Location: 18196-19140 bp Num of repeats: 16 Spacers: s11-s25 CRISPR array Location: 18196-19140 bp Num of repeats: 16 Spacers: s11-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8322-8962 bp]: array | spacers
           [Locus range 18196-19140 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)