CRISPRone

CRISPRone report for GCA_003411645.2_ASM341164v2

♦ Seq 1: QVEC02000096.1 Pseudomonas aeruginosa strain PABL009 NODE_96_length_21701_cov_52.6279, whole genome shotgun sequence

⇒Summary: seq-len = 21701 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10993-21592 bp Zoom in on locus 1 x19 x10 CRISPR array Location: 10993-12101 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 10993-12101 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 12284-12847 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 12851-13879 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 13890-14873 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 14860-16161 bp Gene: COG1203:cas3 Type: Type-I Location: 16572-19802 bp Gene: cd09718:cas1 Type: universal Location: 19799-20773 bp CRISPR array Location: 21025-21592 bp Num of repeats: 10 Spacers: s19-s27 CRISPR array Location: 21025-21592 bp Num of repeats: 10 Spacers: s19-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 10993-12101 bp]: array | spacers
           [Locus range 21025-21592 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QVEC02000119.1 Pseudomonas aeruginosa strain PABL009 NODE_119_length_17295_cov_46.1121, whole genome shotgun sequence

⇒Summary: seq-len = 17295 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 110-859 bp Zoom in on locus 1 x13 CRISPR array Location: 110-859 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 110-859 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 110-859 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)