CRISPRone

CRISPRone report for GCA_003411745.2_ASM341174v2

♦ Seq 1: QVCT02000042.1 Pseudomonas aeruginosa strain PABL049 NODE_42_length_55323_cov_55.6144, whole genome shotgun sequence

⇒Summary: seq-len = 55323 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19313-30532 bp Zoom in on locus 1 x26 x19 CRISPR array Location: 19313-20841 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 19313-20841 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09718:cas1 Type: universal Location: 21102-22076 bp Gene: COG1203:cas3 Type: Type-I Location: 22073-25303 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 25361-26665 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26652-27635 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 27646-28674 bp Gene: cd09739:cas6f Type: other Location: 28678-29241 bp CRISPR array Location: 29425-30532 bp Num of repeats: 19 Spacers: s26-s43 CRISPR array Location: 29425-30532 bp Num of repeats: 19 Spacers: s26-s43 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 19313-20841 bp]: array | spacers
           [Locus range 29425-30532 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)