CRISPRone

CRISPRone report for GCA_003411805.2_ASM341180v2

♦ Seq 1: QVCV02000044.1 Pseudomonas aeruginosa strain PABL047 NODE_44_length_50942_cov_50.433, whole genome shotgun sequence

⇒Summary: seq-len = 50942 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19390-31630 bp Zoom in on locus 1 x19 x43 CRISPR array Location: 19390-20498 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 19390-20498 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 20681-21244 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 21248-22276 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 22287-23270 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 23257-24561 bp Gene: COG1203:cas3 Type: Type-I Location: 24619-27849 bp Gene: cd09718:cas1 Type: universal Location: 27846-28820 bp CRISPR array Location: 29082-31630 bp Num of repeats: 43 Spacers: s19-s60 CRISPR array Location: 29082-31630 bp Num of repeats: 43 Spacers: s19-s60 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 19390-20498 bp]: array | spacers
           [Locus range 29082-31630 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)