CRISPRone

CRISPRone report for GCA_003411815.2_ASM341181v2

♦ Seq 1: QVDP02000069.1 Pseudomonas aeruginosa strain PABL024 NODE_69_length_33467_cov_54.0538, whole genome shotgun sequence

⇒Summary: seq-len = 33467 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8282-19040 bp Zoom in on locus 1 x13 x13 CRISPR array Location: 8282-9044 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 8282-9044 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09641:cas3HD Type: Type-I Location: 9819-12500 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12503-14071 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 14068-14598 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14608-15750 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15752-16414 bp Gene: pfam08798:cas6e Type: other Location: 16389-17000 bp Gene: cd09719:cas1 Type: universal Location: 17027-17917 bp Gene: pfam09707:cas2 Type: universal Location: 17914-18213 bp CRISPR array Location: 18278-19040 bp Num of repeats: 13 Spacers: s13-s24 CRISPR array Location: 18278-19040 bp Num of repeats: 13 Spacers: s13-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8282-9044 bp]: array | spacers
           [Locus range 18278-19040 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)