CRISPRone

CRISPRone report for GCA_003411965.2_ASM341196v2

♦ Seq 1: QVDI02000064.1 Pseudomonas aeruginosa strain PABL032 NODE_64_length_33602_cov_50.8927, whole genome shotgun sequence

⇒Summary: seq-len = 33602 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33066-33514 bp Zoom in on locus 1 x8 CRISPR array Location: 33066-33514 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 33066-33514 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 33066-33514 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QVDI02000074.1 Pseudomonas aeruginosa strain PABL032 NODE_74_length_25524_cov_73.2786, whole genome shotgun sequence

⇒Summary: seq-len = 25524 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24026-25379 bp Zoom in on locus 1 x23 CRISPR array Location: 24026-25379 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 24026-25379 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 24026-25379 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QVDI02000104.1 Pseudomonas aeruginosa strain PABL032 NODE_104_length_10481_cov_66.1644, whole genome shotgun sequence

⇒Summary: seq-len = 10481 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 129-10336 bp Zoom in on locus 1 x8 x19 CRISPR array Location: 129-578 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 129-578 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09739:cas6f Type: other Location: 827-1390 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1394-2422 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2433-3416 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3403-4707 bp Gene: COG1203:cas3 Type: Type-I Location: 4765-7995 bp Gene: cd09718:cas1 Type: universal Location: 7992-8966 bp CRISPR array Location: 9227-10336 bp Num of repeats: 19 Spacers: s8-s25 CRISPR array Location: 9227-10336 bp Num of repeats: 19 Spacers: s8-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 129-578 bp]: array | spacers
           [Locus range 9227-10336 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)