CRISPRone

CRISPRone report for GCA_003411985.2_ASM341198v2

♦ Seq 1: QVEF02000037.1 Pseudomonas aeruginosa strain PABL004 NODE_37_length_55777_cov_92.1768, whole genome shotgun sequence

⇒Summary: seq-len = 55777 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 15089-24306 bp Zoom in on locus 1 x22 Gene: cd09641:cas3HD Type: Type-I Location: 15089-16438 bp Gene: COG1203:cas3 Type: Type-I Location: 16465-17322 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 17372-18046 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 18043-19836 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 19833-20702 bp Gene: pfam01930:cas4 Type: Type-I Location: 20721-21353 bp Gene: cd09721:cas1 Type: universal Location: 21357-22397 bp Gene: cd09725:cas2 Type: universal Location: 22407-22697 bp CRISPR array Location: 22877-24306 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 22877-24306 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 22877-24306 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)