CRISPRone

CRISPRone report for GCA_003413835.1_ASM341383v1

♦ Seq 1: QURF01000021.1 Pseudomonas aeruginosa strain W-101 scaffold21, whole genome shotgun sequence

⇒Summary: seq-len = 48515 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 312-10332 bp Zoom in on locus 1 x16 x9 CRISPR array Location: 312-1240 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 312-1240 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09718:cas1 Type: universal Location: 1501-2475 bp Gene: COG1203:cas3 Type: Type-I Location: 2472-5702 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5760-7064 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7051-8034 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8045-9073 bp Gene: cd09739:cas6f Type: other Location: 9077-9640 bp CRISPR array Location: 9825-10332 bp Num of repeats: 9 Spacers: s16-s23 CRISPR array Location: 9825-10332 bp Num of repeats: 9 Spacers: s16-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 312-1240 bp]: array | spacers
           [Locus range 9825-10332 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QURF01000009.1 Pseudomonas aeruginosa strain W-101 scaffold9, whole genome shotgun sequence

⇒Summary: seq-len = 208493 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 313-1783 bp Zoom in on locus 1 x25 CRISPR array Location: 313-1783 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 313-1783 bp Num of repeats: 25 Spacers: s1-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 313-1783 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)