CRISPRone

CRISPRone report for GCA_003429205.1_ASM342920v1

♦ Seq 1: CP031660.1 Pseudomonas aeruginosa strain PABL017 chromosome, complete genome

⇒Summary: seq-len = 6503460 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1504399-1504907 bp 2 Locus 2: 2855484-2866402 bp Zoom in on locus 1 x9 Zoom in on locus 2 x21 x19 CRISPR array Location: 1504399-1504907 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 1504399-1504907 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 2855484-2856712 bp Num of repeats: 21 Spacers: s9-s28 CRISPR array Location: 2855484-2856712 bp Num of repeats: 21 Spacers: s9-s28 Gene: cd09739:cas6f Type: other Location: 2856895-2857458 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2857462-2858490 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2858501-2859484 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2859471-2860775 bp Gene: COG1203:cas3 Type: Type-I Location: 2860833-2864063 bp Gene: cd09718:cas1 Type: universal Location: 2864060-2865034 bp CRISPR array Location: 2865295-2866402 bp Num of repeats: 19 Spacers: s29-s46 CRISPR array Location: 2865295-2866402 bp Num of repeats: 19 Spacers: s29-s46 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1504399-1504907 bp]: array | spacers
           [Locus range 2855484-2856712 bp]: array | spacers
           [Locus range 2865295-2866402 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)