CRISPRone

CRISPRone report for GCA_003437815.1_ASM343781v1

♦ Seq 1: QSSJ01000002.1 Bacteroides fragilis strain TF05-31 TF05-31.Scaf2, whole genome shotgun sequence

⇒Summary: seq-len = 539353 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 175749-179362 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 175749-176417 bp Gene: unk Type: unknown Location: 176420-177193 bp Gene: unk Type: unknown Location: 177201-178466 bp Gene: pfam13280:WYL Type: other Location: 178463-179362 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QSSJ01000021.1 Bacteroides fragilis strain TF05-31 TF05-31.Scaf21, whole genome shotgun sequence

⇒Summary: seq-len = 48778 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 17101-26341 bp Zoom in on locus 1 x22 Gene: cd09652:cas6 Type: other Location: 17101-17772 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 17784-18347 bp Gene: COG1203:cas3 Type: Type-I Location: 18337-20496 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 20500-21825 bp Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 21838-22896 bp Gene: pfam01930:cas4 Type: Type-I Location: 22961-23473 bp Gene: cd09722:cas1 Type: universal Location: 23470-24483 bp Gene: cd09725:cas2 Type: universal Location: 24486-24749 bp CRISPR array Location: 24962-26341 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 24962-26341 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 24962-26341 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QSSJ01000009.1 Bacteroides fragilis strain TF05-31 TF05-31.Scaf9, whole genome shotgun sequence

⇒Summary: seq-len = 223814 bp; # of CRISPR array = 0; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 217052-223665 bp Zoom in on locus 1 Gene: cd09643:cas9 Type: Subtype-II-C Location: 217052-221362 bp Gene: unk Type: unknown Location: 221378-221902 bp Gene: unk Type: unknown Location: 221969-222277 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 222397-223329 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 223333-223665 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)