CRISPRone

CRISPRone report for GCA_003438775.1_ASM343877v1

♦ Seq 1: QSTV01000001.1 Bacteroides fragilis strain OM06-30AC OM06-30AC.Scaf1, whole genome shotgun sequence

⇒Summary: seq-len = 884988 bp; # of CRISPR array = 2; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 149526-149769 bp 2 Locus 2: 755399-765874 bp Zoom in on locus 1 x4 Zoom in on locus 2 x13 CRISPR array Location: 149526-149769 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 149526-149769 bp Num of repeats: 4 Spacers: s1-s3 Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 755399-755647 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 756048-756809 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 756814-758616 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 758609-759748 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 759768-760607 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 760620-761030 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 761033-761977 bp Gene: cd09634:cas1 Type: universal Location: 761997-764267 bp Gene: cd09725:cas2 Type: universal Location: 764261-764551 bp CRISPR array Location: 764999-765874 bp Num of repeats: 13 Spacers: s4-s15 CRISPR array Location: 764999-765874 bp Num of repeats: 13 Spacers: s4-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 149526-149769 bp]: array | spacers
           [Locus range 764999-765874 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QSTV01000003.1 Bacteroides fragilis strain OM06-30AC OM06-30AC.Scaf3, whole genome shotgun sequence

⇒Summary: seq-len = 455074 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 266664-270277 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 266664-267563 bp Gene: unk Type: unknown Location: 267560-268825 bp Gene: unk Type: unknown Location: 268833-269606 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 269609-270277 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)