CRISPRone

CRISPRone report for GCA_003438895.1_ASM343889v1

♦ Seq 1: QSUD01000003.1 Bacteroides fragilis strain OM06-1 OM06-1.Scaf3, whole genome shotgun sequence

⇒Summary: seq-len = 455129 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 184804-188417 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 184804-185472 bp Gene: unk Type: unknown Location: 185475-186248 bp Gene: unk Type: unknown Location: 186256-187521 bp Gene: pfam13280:WYL Type: other Location: 187518-188417 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QSUD01000002.1 Bacteroides fragilis strain OM06-1 OM06-1.Scaf2, whole genome shotgun sequence

⇒Summary: seq-len = 1123747 bp; # of CRISPR array = 2; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 119083-129557 bp 2 Locus 2: 735230-735474 bp Zoom in on locus 1 x13 Zoom in on locus 2 x4 CRISPR array Location: 119083-119957 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 119083-119957 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09725:cas2 Type: universal Location: 120405-120695 bp Gene: cd09634:cas1 Type: universal Location: 120689-122959 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 122979-123923 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 123926-124336 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 124349-125188 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 125208-126347 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 126340-128142 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 128147-128908 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 129309-129557 bp CRISPR array Location: 735230-735474 bp Num of repeats: 4 Spacers: s13-s15 CRISPR array Location: 735230-735474 bp Num of repeats: 4 Spacers: s13-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 119083-119957 bp]: array | spacers
           [Locus range 735230-735474 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)