CRISPRone

CRISPRone report for GCA_003439285.1_ASM343928v1

♦ Seq 1: QSVD01000004.1 Bacteroides fragilis strain OM02-9 OM02-9.Scaf4, whole genome shotgun sequence

⇒Summary: seq-len = 494060 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120150-123763 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 120150-120818 bp Gene: unk Type: unknown Location: 120821-121594 bp Gene: unk Type: unknown Location: 121602-122867 bp Gene: pfam13280:WYL Type: other Location: 122864-123763 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QSVD01000001.1 Bacteroides fragilis strain OM02-9 OM02-9.Scaf1, whole genome shotgun sequence

⇒Summary: seq-len = 1041720 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 138617-153835 bp Zoom in on locus 1 x23 CRISPR array Location: 138617-140207 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 138617-140207 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09725:cas2 Type: universal Location: 140655-140945 bp Gene: cd09634:cas1 Type: universal Location: 140939-143209 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 143229-144173 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 144176-144586 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 144599-145438 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 145458-146597 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 146590-148392 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 148397-149806 bp Gene: unk Type: unknown Location: 149820-150299 bp Gene: cash17:cash17 Type: Type- Location: 150296-151723 bp Gene: unk Type: unknown Location: 151768-152547 bp Gene: unk Type: unknown Location: 152523-153149 bp Gene: cls000004:cas6 Type: other Location: 153167-153835 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 138617-140207 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)