CRISPRone

CRISPRone report for GCA_003463555.1_ASM346355v1

♦ Seq 1: QSDH01000078.1 Bacteroides fragilis strain CF01-8 CF01-8.Scaf78, whole genome shotgun sequence

⇒Summary: seq-len = 8006 bp; # of CRISPR array = 0; # of cas gene = 6  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 193-7645 bp Zoom in on locus 1 Gene: pfam12469:cas10 Type: Subtype-III-B Location: 193-1884 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 1987-3126 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3146-3985 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3998-4408 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4411-5355 bp Gene: cd09634:cas1 Type: universal Location: 5375-7645 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QSDH01000057.1 Bacteroides fragilis strain CF01-8 CF01-8.Scaf57, whole genome shotgun sequence

⇒Summary: seq-len = 23380 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22058-23359 bp Zoom in on locus 1 x19 CRISPR array Location: 22058-23359 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 22058-23359 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 22058-23359 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)