CRISPRone

CRISPRone report for GCA_003469305.1_ASM346930v1

♦ Seq 1: QSJF01000011.1 Bacteroides fragilis strain AM31-13AC AM31-13AC.Scaf11, whole genome shotgun sequence

⇒Summary: seq-len = 181612 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24483-40100 bp Zoom in on locus 1 x28 Gene: cls000004:cas6 Type: other Location: 24483-25214 bp Gene: unk Type: unknown Location: 25232-25858 bp Gene: unk Type: unknown Location: 25834-26613 bp Gene: cash17:cash17 Type: Type- Location: 26658-28085 bp Gene: unk Type: unknown Location: 28082-28561 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 28575-29984 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 29989-31791 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 31784-32923 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 32943-33782 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 33795-34205 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 34208-35152 bp Gene: cd09634:cas1 Type: universal Location: 35172-37442 bp Gene: cd09725:cas2 Type: universal Location: 37436-37726 bp CRISPR array Location: 38174-40100 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 38174-40100 bp Num of repeats: 28 Spacers: s1-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38174-40100 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QSJF01000009.1 Bacteroides fragilis strain AM31-13AC AM31-13AC.Scaf9, whole genome shotgun sequence

⇒Summary: seq-len = 208123 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 196424-200037 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 196424-197092 bp Gene: unk Type: unknown Location: 197095-197868 bp Gene: unk Type: unknown Location: 197876-199141 bp Gene: pfam13280:WYL Type: other Location: 199138-200037 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)