CRISPRone

CRISPRone report for GCA_003472195.1_ASM347219v1

♦ Seq 1: QRLH01000004.1 Bacteroides fragilis strain AM13-18 AM13-18.Scaf4, whole genome shotgun sequence

⇒Summary: seq-len = 540617 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 210718-215938 bp 2 Locus 2: 353914-360724 bp Zoom in on locus 1 x9 Zoom in on locus 2 x18 Gene: cls000088:csa5gr11 Type: Subtype-I-A Location: 210718-211944 bp Gene: unk Type: unknown Location: 211945-212799 bp Gene: unk Type: unknown Location: 213088-213255 bp Gene: cd09652:cas6 Type: other Location: 213621-214292 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 214304-214684 bp Gene: cd09722:cas1 Type: universal Location: 214677-214916 bp Gene: cd09725:cas2 Type: universal Location: 214919-215182 bp CRISPR array Location: 215395-215938 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 215395-215938 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 353914-355147 bp Num of repeats: 18 Spacers: s9-s25 CRISPR array Location: 353914-355147 bp Num of repeats: 18 Spacers: s9-s25 Gene: cd09725:cas2 Type: universal Location: 355595-355885 bp Gene: cd09634:cas1 Type: universal Location: 355879-357129 bp Gene: cash17:cash17 Type: Type- Location: 357185-358612 bp Gene: unk Type: unknown Location: 358657-359436 bp Gene: unk Type: unknown Location: 359412-360038 bp Gene: cls000004:cas6 Type: other Location: 360056-360724 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 215395-215938 bp]: array | spacers
           [Locus range 353914-355147 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QRLH01000005.1 Bacteroides fragilis strain AM13-18 AM13-18.Scaf5, whole genome shotgun sequence

⇒Summary: seq-len = 507211 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 377167-380780 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 377167-378066 bp Gene: unk Type: unknown Location: 378063-379328 bp Gene: unk Type: unknown Location: 379336-380109 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 380112-380780 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)