CRISPRone

CRISPRone report for GCA_003571505.1_ASM357150v1

♦ Seq 1: CP012901.1 Pseudomonas aeruginosa strain N15-01092, complete sequence

⇒Summary: seq-len = 6972899 bp; # of CRISPR array = 4; # of cas gene = 17  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2280564-2291319 bp 2 Locus 2: 3828002-3839648 bp 3 Locus 3: 4355938-4363060 bp Zoom in on locus 1 x8 x18 Zoom in on locus 2 x24 x27 Zoom in on locus 3 CRISPR array Location: 2280564-2281020 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 2280564-2281020 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09641:cas3HD Type: Type-I Location: 2281793-2284474 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 2284477-2286045 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 2286042-2286572 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 2286582-2287724 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 2287726-2288388 bp Gene: pfam08798:cas6e Type: other Location: 2288363-2288974 bp Gene: cd09719:cas1 Type: universal Location: 2289001-2289891 bp Gene: pfam09707:cas2 Type: universal Location: 2289888-2290187 bp CRISPR array Location: 2290252-2291319 bp Num of repeats: 18 Spacers: s8-s24 CRISPR array Location: 2290252-2291319 bp Num of repeats: 18 Spacers: s8-s24 CRISPR array Location: 3828002-3829410 bp Num of repeats: 24 Spacers: s25-s47 CRISPR array Location: 3828002-3829410 bp Num of repeats: 24 Spacers: s25-s47 Gene: cd09718:cas1 Type: universal Location: 3829670-3830644 bp Gene: COG1203:cas3 Type: Type-I Location: 3830641-3833871 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3833929-3835233 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3835220-3836203 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3836214-3837242 bp Gene: cd09739:cas6f Type: other Location: 3837246-3837809 bp CRISPR array Location: 3838059-3839648 bp Num of repeats: 27 Spacers: s48-s73 CRISPR array Location: 3838059-3839648 bp Num of repeats: 27 Spacers: s48-s73 Gene: pfam13280:WYL Type: other Location: 4355938-4356810 bp Gene: pfam13280:WYL Type: other Location: 4357045-4358091 bp Gene: pfam13280:WYL Type: other Location: 4362065-4363060 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2280564-2281020 bp]: array | spacers
           [Locus range 2290252-2291319 bp]: array | spacers
           [Locus range 3828002-3829410 bp]: array | spacers
           [Locus range 3838059-3839648 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)