CRISPRone

CRISPRone report for GCA_003585145.1_ASM358514v1

♦ Seq 1: LSQM01000073.1 Pseudomonas aeruginosa strain PA_153543 NODE_7_length_302012_cov_26.4181, whole genome shotgun sequence

⇒Summary: seq-len = 302012 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 190471-201286 bp Zoom in on locus 1 x11 x16 CRISPR array Location: 190471-191110 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 190471-191110 bp Num of repeats: 11 Spacers: s1-s10 Gene: pfam09707:cas2 Type: universal Location: 191175-191474 bp Gene: cd09719:cas1 Type: universal Location: 191471-192361 bp Gene: pfam08798:cas6e Type: other Location: 192388-192927 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 192974-193636 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 193638-194780 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 194790-195320 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 195317-196885 bp Gene: cd09641:cas3HD Type: Type-I Location: 196888-199569 bp CRISPR array Location: 200342-201286 bp Num of repeats: 16 Spacers: s11-s25 CRISPR array Location: 200342-201286 bp Num of repeats: 16 Spacers: s11-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 190471-191110 bp]: array | spacers
           [Locus range 200342-201286 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)