CRISPRone

CRISPRone report for GCA_003585175.1_ASM358517v1

♦ Seq 1: LSQP01000001.1 Pseudomonas aeruginosa strain PA_151908 NODE_10_length_254575_cov_69.654, whole genome shotgun sequence

⇒Summary: seq-len = 254575 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 141984-152437 bp Zoom in on locus 1 x9 x12 CRISPR array Location: 141984-142501 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 141984-142501 bp Num of repeats: 9 Spacers: s1-s8 Gene: pfam09707:cas2 Type: universal Location: 142566-142865 bp Gene: cd09719:cas1 Type: universal Location: 142862-143752 bp Gene: pfam08798:cas6e Type: other Location: 143779-144318 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 144365-145027 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 145029-146171 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 146181-146711 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 146708-148276 bp Gene: cd09641:cas3HD Type: Type-I Location: 148279-150960 bp CRISPR array Location: 151736-152437 bp Num of repeats: 12 Spacers: s9-s19 CRISPR array Location: 151736-152437 bp Num of repeats: 12 Spacers: s9-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 141984-142501 bp]: array | spacers
           [Locus range 151736-152437 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)