CRISPRone

CRISPRone report for GCA_003611335.1_ASM361133v1

♦ Seq 1: NRCD01000022.1 Pseudomonas aeruginosa strain Pa792 K15_S47_R1__paired__contig_22, whole genome shotgun sequence

⇒Summary: seq-len = 116312 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 91078-100939 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 91078-92688 bp Gene: pfam13280:WYL Type: other Location: 92849-93865 bp Gene: unk Type: unknown Location: 95137-95316 bp Gene: unk Type: unknown Location: 95626-96159 bp Gene: pfam13280:WYL Type: other Location: 96174-97049 bp Gene: unk Type: unknown Location: 97180-97467 bp Gene: unk Type: unknown Location: 97602-98180 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 98573-100939 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRCD01000007.1 Pseudomonas aeruginosa strain Pa792 K15_S47_R1__paired__contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 68222 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36780-48398 bp Zoom in on locus 1 x4 x8 x35 CRISPR array Location: 36780-36988 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 36780-36988 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 37298-37746 bp Num of repeats: 8 Spacers: s4-s10 CRISPR array Location: 37298-37746 bp Num of repeats: 8 Spacers: s4-s10 Gene: cd09739:cas6f Type: other Location: 37929-38492 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38496-39524 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39535-40518 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40505-41809 bp Gene: COG1203:cas3 Type: Type-I Location: 41867-45097 bp Gene: cd09718:cas1 Type: universal Location: 45094-46068 bp CRISPR array Location: 46330-48398 bp Num of repeats: 35 Spacers: s11-s44 CRISPR array Location: 46330-48398 bp Num of repeats: 35 Spacers: s11-s44 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36780-36988 bp]: array | spacers
           [Locus range 37298-37746 bp]: array | spacers
           [Locus range 46330-48398 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)