CRISPRone

CRISPRone report for GCA_003625415.1_ASM362541v1

♦ Seq 1: PNER01000001.1 Clostridioides difficile strain 14061807 NODE_1_length_429047_cov_53.4472, whole genome shotgun sequence

⇒Summary: seq-len = 429047 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 87205-87299 bp]: array | spacers
           [Locus range 128920-129612 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: PNER01000003.1 Clostridioides difficile strain 14061807 NODE_3_length_310705_cov_53.9187, whole genome shotgun sequence

⇒Summary: seq-len = 310705 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 112854-114005 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: PNER01000008.1 Clostridioides difficile strain 14061807 NODE_8_length_149797_cov_55.2895, whole genome shotgun sequence

⇒Summary: seq-len = 149797 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23687-23976 bp]: array | spacers
           [Locus range 25841-26197 bp]: array | spacers
           [Locus range 118581-118874 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: PNER01000005.1 Clostridioides difficile strain 14061807 NODE_5_length_236485_cov_55.0972, whole genome shotgun sequence

⇒Summary: seq-len = 236485 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: PNER01000007.1 Clostridioides difficile strain 14061807 NODE_7_length_155019_cov_56.911, whole genome shotgun sequence

⇒Summary: seq-len = 155019 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 26215-27700 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: PNER01000002.1 Clostridioides difficile strain 14061807 NODE_2_length_409302_cov_57.5785, whole genome shotgun sequence

⇒Summary: seq-len = 409302 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 69355-69977 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: PNER01000004.1 Clostridioides difficile strain 14061807 NODE_4_length_289380_cov_54.8114, whole genome shotgun sequence

⇒Summary: seq-len = 289380 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 78444-79130 bp]: array | spacers
           [Locus range 287519-288536 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)