CRISPRone

CRISPRone report for GCA_003626935.2_ASM362693v2

♦ Seq 1: CP032569.2 Pseudomonas aeruginosa strain BA7823 chromosome, complete genome

⇒Summary: seq-len = 6876113 bp; # of CRISPR array = 3; # of cas gene = 14  (type I, IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1349519-1349967 bp 2 Locus 2: 2309615-2316430 bp 3 Locus 3: 2718883-2729071 bp 4 Locus 4: 6117079-6126940 bp Zoom in on locus 1 x8 Zoom in on locus 2 Zoom in on locus 3 x17 x11 Zoom in on locus 4 CRISPR array Location: 1349519-1349967 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 1349519-1349967 bp Num of repeats: 8 Spacers: s1-s7 Gene: mkCas0115:csx3 Type: other Location: 2309615-2310082 bp Gene: pfam13280:WYL Type: other Location: 2310090-2311001 bp Gene: unk Type: unknown Location: 2311368-2311670 bp Gene: unk Type: unknown Location: 2311717-2313108 bp Gene: cd09639:cas3 Type: Type-I Location: 2313542-2316430 bp CRISPR array Location: 2718883-2719871 bp Num of repeats: 17 Spacers: s8-s23 CRISPR array Location: 2718883-2719871 bp Num of repeats: 17 Spacers: s8-s23 Gene: cd09739:cas6f Type: other Location: 2720054-2720617 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2720621-2721649 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2721660-2722643 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2722630-2723934 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 2723992-2724402 bp Gene: COG1203:cas3 Type: Type-I Location: 2724402-2727221 bp Gene: cd09718:cas1 Type: universal Location: 2727218-2728192 bp CRISPR array Location: 2728444-2729071 bp Num of repeats: 11 Spacers: s24-s33 CRISPR array Location: 2728444-2729071 bp Num of repeats: 11 Spacers: s24-s33 Gene: COG1199:DinG Type: Subtype-IV-A Location: 6117079-6119445 bp Gene: unk Type: unknown Location: 6119838-6120416 bp Gene: unk Type: unknown Location: 6120560-6120715 bp Gene: pfam13280:WYL Type: other Location: 6120969-6121844 bp Gene: unk Type: unknown Location: 6121859-6122392 bp Gene: unk Type: unknown Location: 6122702-6122881 bp Gene: pfam13280:WYL Type: other Location: 6124153-6125169 bp Gene: mkCas0115:csx3 Type: other Location: 6125330-6126940 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1349519-1349967 bp]: array | spacers
           [Locus range 2718883-2719871 bp]: array | spacers
           [Locus range 2728444-2729071 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)