CRISPRone

CRISPRone report for GCA_003628805.1_ASM362880v1

♦ Seq 1: RAGB01000029.1 Pseudomonas aeruginosa strain HUM-302 PA3_H8_NODE_30_length_66813_cov_40.2452_ID_59, whole genome shotgun sequence

⇒Summary: seq-len = 66813 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36374-47593 bp Zoom in on locus 1 x19 x26 CRISPR array Location: 36374-37482 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 36374-37482 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 37665-38228 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38232-39260 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39271-40254 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40241-41545 bp Gene: COG1203:cas3 Type: Type-I Location: 41603-44833 bp Gene: cd09718:cas1 Type: universal Location: 44830-45804 bp CRISPR array Location: 46066-47593 bp Num of repeats: 26 Spacers: s19-s43 CRISPR array Location: 46066-47593 bp Num of repeats: 26 Spacers: s19-s43 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36374-37482 bp]: array | spacers
           [Locus range 46066-47593 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)