CRISPRone

CRISPRone report for GCA_003628865.1_ASM362886v1

♦ Seq 1: RAFZ01000026.1 Pseudomonas aeruginosa strain HUM-313-D1 NODE_37_length_49509_cov_22.1794_ID_73, whole genome shotgun sequence

⇒Summary: seq-len = 49509 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36358-48417 bp Zoom in on locus 1 x20 x39 CRISPR array Location: 36358-37526 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 36358-37526 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09739:cas6f Type: other Location: 37709-38272 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38276-39304 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39315-40298 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40285-41589 bp Gene: COG1203:cas3 Type: Type-I Location: 41647-44877 bp Gene: cd09718:cas1 Type: universal Location: 44874-45848 bp CRISPR array Location: 46110-48417 bp Num of repeats: 39 Spacers: s20-s57 CRISPR array Location: 46110-48417 bp Num of repeats: 39 Spacers: s20-s57 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36358-37526 bp]: array | spacers
           [Locus range 46110-48417 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)