CRISPRone

CRISPRone report for GCA_003629655.1_ASM362965v1

♦ Seq 1: RAEM01000015.1 Pseudomonas aeruginosa strain VET-46 PA4_A2_NODE_30_length_67781_cov_34.2233_ID_59, whole genome shotgun sequence

⇒Summary: seq-len = 67781 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37073-47155 bp Zoom in on locus 1 x9 x17 CRISPR array Location: 37073-37580 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 37073-37580 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09739:cas6f Type: other Location: 37763-38326 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38330-39358 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39369-40352 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40339-41643 bp Gene: COG1203:cas3 Type: Type-I Location: 41701-44931 bp Gene: cd09718:cas1 Type: universal Location: 44928-45902 bp CRISPR array Location: 46167-47155 bp Num of repeats: 17 Spacers: s9-s24 CRISPR array Location: 46167-47155 bp Num of repeats: 17 Spacers: s9-s24 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37073-37580 bp]: array | spacers
           [Locus range 46167-47155 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RAEM01000020.1 Pseudomonas aeruginosa strain VET-46 PA4_A2_NODE_2_length_483708_cov_43.4149_ID_3, whole genome shotgun sequence

⇒Summary: seq-len = 483708 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 291257-300654 bp Zoom in on locus 1 x25 CRISPR array Location: 291257-292877 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 291257-292877 bp Num of repeats: 25 Spacers: s1-s24 Gene: cd09725:cas2 Type: universal Location: 293059-293349 bp Gene: cd09721:cas1 Type: universal Location: 293359-294399 bp Gene: pfam01930:cas4 Type: Type-I Location: 294403-295035 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 295054-295923 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 295935-297698 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 297695-298369 bp Gene: cd09641:cas3HD Type: Type-I Location: 298420-300654 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 291257-292877 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)